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• AMPCOMBI2_PARSETABLES error during stage-out with process.stageOutMode = 'move' -- "mv: cannot stat 'XYZ': No such file or directory"

  skipped:
  Fix linting from a comment#582:Issue comment#524 (comment)createdbyjasmezz
  Oct 26, 20261s
  More actions for workflow run 582

• Close user-tagged issues and PRs

  completed successfully:
  Close user-tagged issues and PRs#179:Scheduled
  main

  Oct 25, 20268s
  More actions for workflow run 179

• AMPCOMBI2_PARSETABLES error during stage-out with process.stageOutMode = 'move' -- "mv: cannot stat 'XYZ': No such file or directory"

  skipped:
  Fix linting from a comment#581:Issue comment#524 (comment)createdbyjfy133
  Oct 23, 20261s
  More actions for workflow run 581

• AMPCOMBI2_PARSETABLES error during stage-out with process.stageOutMode = 'move' -- "mv: cannot stat 'XYZ': No such file or directory"

  skipped:
  Fix linting from a comment#580:Issue comment#524 (comment)createdbyamizeranschi
  Oct 23, 20261s
  More actions for workflow run 580

• prodigal process expects gzipped file

  skipped:
  Fix linting from a comment#579:Issue comment#541 (comment)createdbyjfy133
  Oct 23, 20261s
  More actions for workflow run 579

• ARG gene symbols are not standardized across tools in hAMRonization summary, making cross-tool comparison difficult

  skipped:
  Fix linting from a comment#578:Issue comment#525 (comment)createdbyjfy133
  Oct 23, 20261s
  More actions for workflow run 578

• AMPCOMBI2_PARSETABLES error during stage-out with process.stageOutMode = 'move' -- "mv: cannot stat 'XYZ': No such file or directory"

  skipped:
  Fix linting from a comment#577:Issue comment#524 (comment)createdbyjfy133
  Oct 23, 202610s
  More actions for workflow run 577

• Update argNorm to current version

  skipped:
  Fix linting from a comment#576:Issue comment#487 (comment)createdbyjfy133
  Oct 23, 20261s
  More actions for workflow run 576

• Integrate the existing eggNOG-mapper module into the pipeline

  skipped:
  Fix linting from a comment#575:Issue comment#473 (comment)createdbyjfy133
  Oct 23, 20262s
  More actions for workflow run 575

• Benchmarking tests showing resource values are suboptimal

  skipped:
  Fix linting from a comment#574:Issue comment#292 (comment)createdbyjfy133
  Oct 23, 20262s
  More actions for workflow run 574

• Add support for generating mmseqs taxonomy reports

  skipped:
  Fix linting from a comment#573:Issue comment#466 (comment)createdbyjfy133
  Oct 23, 20262s
  More actions for workflow run 573

• How to speed up MMseqs2 taxonomy assignment with GTDB database on large contigs?

  skipped:
  Fix linting from a comment#572:Issue comment#424 (comment)createdbyjfy133
  Oct 23, 20262s
  More actions for workflow run 572

• Consider passing the annotation tool output to modules input for more standardization

  skipped:
  Fix linting from a comment#571:Issue comment#179 (comment)createdbyjfy133
  Oct 23, 20261s
  More actions for workflow run 571

• Consider passing the annotation tool output to modules input for more standardization

  skipped:
  Fix linting from a comment#570:Issue comment#179 (comment)createdbyjfy133
  Oct 23, 20262s
  More actions for workflow run 570

• Add pharokka to nf-core/funcscan

  skipped:
  Fix linting from a comment#569:Issue comment#329 (comment)createdbyjfy133
  Oct 23, 20261s
  More actions for workflow run 569

• Close user-tagged issues and PRs

  completed successfully:
  Close user-tagged issues and PRs#178:Scheduled
  main

  Oct 18, 20267s
  More actions for workflow run 178

• RGI_MAIN completes with exit 0 and truncated output after sub-process OOM kill

  skipped:
  Fix linting from a comment#568:Issue comment#551 (comment)createdbyjfy133
  Oct 15, 20261s
  More actions for workflow run 568

• Close user-tagged issues and PRs

  completed successfully:
  Close user-tagged issues and PRs#177:Scheduled
  main

  Oct 11, 20267s
  More actions for workflow run 177

• Post PR comment

  completed successfully:
  Post PR comment#284:completedbymashehu
  Oct 8, 202612s
  More actions for workflow run 284

• Move seqeralabs/action-tower-launch to @v2 (v2.4.0)

  completed successfully:
  nf-core AWS full size tests#307:Pull request#553submittedbyjfy133
  Oct 8, 202623s
  More actions for workflow run 307

• Post PR comment

  completed successfully:
  Post PR comment#283:completedbymashehu
  Oct 8, 202612s
  More actions for workflow run 283

• Post PR comment

  completed successfully:
  Post PR comment#282:in_progressbymashehu
  Oct 8, 202612s
  More actions for workflow run 282

• Post PR comment

  completed successfully:
  Post PR comment#281:in_progressbymashehu
  Oct 8, 202613s
  More actions for workflow run 281

• Post PR comment

  completed successfully:
  Post PR comment#280:completedbymashehu
  Oct 8, 202612s
  More actions for workflow run 280

• Post PR comment

  completed successfully:
  Post PR comment#279:completedbymashehu
  Oct 8, 202613s
  More actions for workflow run 279