Skip to content

Add pharokka to nf-core/funcscan #329

Closed as not planned
Closed as not planned

Description

@CarsonJM

pharokka (https://github.com/gbouras13/pharokka) is a tool used to functionally annotate phage sequences. It is similar to its bacterial counterparts (Prokka and Bakta).

### Tasks
- [ ] https://github.com/nf-core/modules/issues/4619
- [ ] Add pharokka to nf-core/funcscan

Activity

  1. changed the title [-]Add pharokka ot nf-core/phageannotator[/-] [+]Add pharokka to nf-core/phageannotator[/+] on Dec 15, 2023
  2. changed the title [-]Add pharokka to nf-core/phageannotator[/-] [+]Add pharokka to nf-core/funcscan[/+] on Dec 15, 2023
  3. self-assigned this
    on Jan 12, 2024
  4. jfy133 commented on Oct 23, 2026

    @jfy133
    Member

    No one else has requested this since, so will close in the meantime. But we can reopen if someone else requests.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

Labels

feature-requestRequest for a new pipeline feature

Type

No type

Projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions