Skip to content
@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S. No PII or PHI permitted

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain.

If you would like to create a new project, please fill out an issue on https://github.com/cdcgov/template logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

No PII/PHI permitted for hosting in this environment.

Pinned Loading

  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 25 35

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    41 50

Repositories

Showing 10 of 574 repositories
  • cfa-flu-simulator Public

    An interactive simulator ODE model

    CDCgov/cfa-flu-simulator's past year of commit activity
    Rust 1 Apache-2.0 1 42 5 Updated Oct 14, 2026
  • ixa Public
    CDCgov/ixa's past year of commit activity
    Rust 36 Apache-2.0 7 64 11 Updated Oct 14, 2026
  • zoe Public

    Zoe provides both broad and highly specialized implementations for bioinformatics. In particular, we focus on common data formats and methods relevant for the sequencing of RNA viruses.

    CDCgov/zoe's past year of commit activity
    Rust 8 Apache-2.0 3 0 0 Updated Oct 14, 2026
  • cdc-open-viz Public

    CDC OpenViz is a library of React packages for data visualization.

    CDCgov/cdc-open-viz's past year of commit activity
    TypeScript 55 Apache-2.0 29 0 7 Updated Oct 14, 2026
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes's past year of commit activity
    Python 8 8 0 0 Updated Oct 14, 2026
  • PyRenew Public

    Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.

    CDCgov/PyRenew's past year of commit activity
    Python 30 Apache-2.0 11 64 12 Updated Oct 13, 2026
  • cfa-dagster Public

    A package to get CFA users running quickly with Dagster on CFA's azure infrastructure.

    CDCgov/cfa-dagster's past year of commit activity
    Python 8 Apache-2.0 1 10 9 Updated Oct 13, 2026
  • sirfunctions Public

    Key functions used by the SIR team

    CDCgov/sirfunctions's past year of commit activity
    R 4 1 16 5 Updated Oct 13, 2026
  • polarbayes Public

    get tidy polars dataframes from arviz

    CDCgov/polarbayes's past year of commit activity
    Python 6 Apache-2.0 0 5 0 Updated Oct 13, 2026
  • CDCgov/oamd-bio-test-data's past year of commit activity
    0 Apache-2.0 1 0 1 Updated Oct 13, 2026